Differential Expression Analysis

InMoose offers a Python port of the well-known R Bioconductor packages:

• DESeq2 package [Love2014] in module deseq2.

• edgeR package [Chen2016] in module edgepy.

• limma package [Ritchie2015]. in module limma.

Note that not all features of the R packages are necessarily ported. Extending the functionality of these modules will be based on user requests, so do not hesitate to open an issue if your favorite feature is missing.